Employee Advance Paid through Payables Module

SOLVED

We issued an "advance" to an employee in the form of an AP check made out to the company needing to be paid by the employee.  Our AP clerk coded this payment to our advance GL account.  Is there a way to manually add in this advance to show properly in the Payroll module without double-posting to the advance GL account?  Ideally we'd like the advance to show up just like our normally advances paid directly to employees and pull over on reports appropriately.  I wasn't sure if there is some kind of way to manually add in an amount for an employee advance without effecting GL, so that advance repayment deductions will reflect the correct amount due.